Last updated: 2023-06-21

Checks: 2 0

Knit directory: GlobalStructure/

This reproducible R Markdown analysis was created with workflowr (version 1.7.0). The Checks tab describes the reproducibility checks that were applied when the results were created. The Past versions tab lists the development history.

R Markdown file: up-to-date

Great! Since the R Markdown file has been committed to the Git repository, you know the exact version of the code that produced these results.

Repository version: dc7f1fb

Great! You are using Git for version control. Tracking code development and connecting the code version to the results is critical for reproducibility.

The results in this page were generated with repository version dc7f1fb. See the Past versions tab to see a history of the changes made to the R Markdown and HTML files.

Note that you need to be careful to ensure that all relevant files for the analysis have been committed to Git prior to generating the results (you can use wflow_publish or wflow_git_commit). workflowr only checks the R Markdown file, but you know if there are other scripts or data files that it depends on. Below is the status of the Git repository when the results were generated: 


Ignored files:
    Ignored:    .Rhistory
    Ignored:    .Rproj.user/
    Ignored:    1_Raw/.DS_Store
    Ignored:    2_Derived/.DS_Store
    Ignored:    3_Results/.DS_Store
    Ignored:    renv/library/
    Ignored:    renv/staging/

Unstaged changes:
    Modified:   3_Results/violin_rep_center_release.pdf

Note that any generated files, e.g. HTML, png, CSS, etc., are not included in this status report because it is ok for generated content to have uncommitted changes.

These are the previous versions of the repository in which changes were made to the R Markdown (analysis/license.Rmd) and HTML (docs/license.html) files. If you’ve configured a remote Git repository (see ?wflow_git_remote), click on the hyperlinks in the table below to view the files as they were in that past version.

File Version Author Date Message
Rmd dc7f1fb EugOT 2023-06-21 add citation information
html d479af8 Evgenii O. Tretiakov 2023-04-05 Build site.
Rmd baf2fd4 Evgenii O. Tretiakov 2023-04-05 Start workflowr project.

This repository contains code and output of the analysis of mitochondria DNA deletions data for the article Shamanskiy, V. et al., 2023.

Please see file CITATION in the root of this GitHub repo that contains the citation information.

To see the results of the analysis please visit the analysis website.

The code in this analysis is covered by the GNU General Public License v3.0 and the written content on this website is covered by a Creative Commons CC-BY license.

The publications mentioned and datasets used are covered by their respective licenses and usage agreements. Please refer to those sources for details.